Introduction

SimTracker works with a flexible network model template written for the NEURON simulator. SimTracker supports the modeler through every step of the modeling process, from designing the model and writing the code to executing the simulations and analyzing the results. SimTracker even helps modelers execute large scale, parallel neural network simulations on supercomputers. Additionally, SimTracker works with code versioning systems to track the code and parameters used to run every simulation, ensuring that each simulation is fully documented and that any model result can be reproduced.

SimTracker and its associated model code template allow modelers to quickly characterize their model components in experimental terms, including activation and inactivation curves for ion channels, paired recordings for synaptic connections, and current injection sweeps for intrinsic properties of single cells. In addition, SimTracker is suitable for those with limited modeling experience, providing a structured workflow that can serve as a didactic tool to introduce new modelers to good programming practices and to concepts and pitfalls associated with network models and parallel computing.

Tutorials